Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944710.1_cds_XP_016487452.1_78180
CDS Infomation

[gene=LOC107807556] [db_xref=GeneID:107807556] [protein=two-component response regulator ARR2-like] [protein_id=XP_016487452.1] [location=join(16051..16225,16997..17149,17249..17638,19102..19178,19848..21017,21105..21176)] [gbkey=CDS]
Sequence

ATGAATCTTGGTGTTGGGTCAGTTGTGAAAAATATGTCTGGTGCTAGATGTAGTGTTTCT
TGGAAGTCCAATGATAACAACCAGTTTCCAGCTGGTTTAAGGGTACTTGTTGTAGATGAT
GATCCTACTTGTCTTAGGATCTTGGAAAAGATGCTTTGGAATTGCCACTATGAAGTCACC
AAGTCTAATCGAGCAGAGAGTGCATTATCATTGCTCCGGGAAAACAGAAATGGTTTCGAC
ATTGTTATCAGTGATGTCCACATGCCAGACATGGATGGTTTCAAACTTCTTGAGCATGTT
GGTCTGGAAATGGACCTGCCTGTTATAATGATGTCTGCGGATGACAGTAAAGATGTCGTT
ATGAAAGGTGTTACTCATGGTGCATGTGATTATCTGATCAAACCGGTGCGCATTGAGGCA
TTGAAGAACATTTGGCAGCATGTGATTCGTAAAAAGAAGCATGAGTGGAAGGACAAAGAT
TTTGATCAATCAGCAACGGCGGAAGCGGGAGATCGACAGCAGAAACCACCAGAAGATGTT
GATTATTCATCTTCAGCTAATGAAGGAGGGAACTGGAAAAGCTCAAAGAGAAGAAAGGAG
GAGGAAGATGAAACTGAAGAAAGGGATGACTCGTCCTCGTTAAAGAAGCCCCGTGTGGTT
TGGTCAGTTGAGCTTCATCAACAGTTTGTACAAGCTGTTAATCAACTTGGAATTGACAAG
GCTGTTCCCAAGAAAATTCTCGAACTGATGAATGTTCCTGGGCTAACCAGAGAAAACGTT
GCTAGCCACCTTCAGAAATACCGGCTGTATCTCAGGAGGTTGAGCGGTGTATCACAGCAT
CCGAATGGACTAAATAACTCTTTCATGGGGCACCCGGAAGCAACATATGGAATGTCTTCT
TTCAATGGGCTTGAGCTTCAAGCTTTAGCTGCCACAGGTCAACTACCTGCGCAAAGTCTT
GCTACCCTCCAAGCGGCTGCATTGGGTAGGTCTGCAACAAAAGCTGCTATATCTATGCCT
CTAGTAGATCAAAGAAACCTTTTCAGCTTTGAAAATCCCAAGTTGAGATTTCCCGAGGGA
CAGCAACAACTAAATAATAGCAATAAGCAAATTAACTTGCTTCATGGGATACCAACAACC
ATGGAACCGAAGCAGCTTGCAGATCTGCACCAGTCCTCGCACTCGCCGTCCTTTGTGGCT
ATGAATATGCAAGGGAACTCCAGAGTGCAGCAAAATAACACTCTACTGATGCATATGTCT
CAACAACAACAACAACAACCGTCTAGGGCTCAAATGCTAAATGAAACCAATAATGGTAGT
CAAGTTTCGCGGCCTCCATTGTCCATGTCACAACAACCTTTGTCGTCAAATGGTATACCT
GGTGCAGTCTTATCACGGAGTGGTGGTATTGTTGCCAATGTACGAGGGCCTGTATACAGT
CCAGTCTCCCAAGCATCTCCTATGGTAGATTTCTCGCTGAACCAAAACACGGAGTTGCAA
AACAACAGCTTTCCTCTTGTGAGTAGTGATTCGGGGATGTCAACTATGACATCCAAAAGA
ATGCTTCAGGAAGAGGTTAACTCTGATATTAGACGATCTAGAGGATTCCCTTCTGATTAT
AATATGTTTGATGAACTGCATCCGCAAAAATCACAAGATTGGGGTTTATCAAGTGTTGGC
TCAACCTTCAACGCCTCTCATCATTCAACTATACCAGGAACCCTAGATATCTCACCGTCC
ATGCTAGTTCAACAAGGTATTTCTTCAATGAAGAGGAATGGACAAAATGGGATTTCTCCT
ATAAGCAACGCTTTCTCTAGCAGGGAGGAAAGTGGAAATGTTAATCCTATGGGTGGAAAT
TTGCTTACTGTTAAAGCTGAACAACTTCCTGATGCGAGCTACCAAAGTAGCTTTTTTCCA
GACCAATTTGGACAGGATGACCTCATGAGTGCCCTTCTGAAGCAGCAAGAAAGTGTTGGA
CCAGTTGAAACTGAGTTTGGCTTTGATGGATATGCACTGGACAATCTTCCTGTGTAA

Peptide Sequence

PEP ID

XP_016487452.1
PEP Infomation

PREDICTED: two-component response regulator ARR2-like [Nicotiana tabacum]
Sequence

MNLGVGSVVKNMSGARCSVSWKSNDNNQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVT
KSNRAESALSLLRENRNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVV
MKGVTHGACDYLIKPVRIEALKNIWQHVIRKKKHEWKDKDFDQSATAEAGDRQQKPPEDV
DYSSSANEGGNWKSSKRRKEEEDETEERDDSSSLKKPRVVWSVELHQQFVQAVNQLGIDK
AVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPNGLNNSFMGHPEATYGMSS
FNGLELQALAATGQLPAQSLATLQAAALGRSATKAAISMPLVDQRNLFSFENPKLRFPEG
QQQLNNSNKQINLLHGIPTTMEPKQLADLHQSSHSPSFVAMNMQGNSRVQQNNTLLMHMS
QQQQQQPSRAQMLNETNNGSQVSRPPLSMSQQPLSSNGIPGAVLSRSGGIVANVRGPVYS
PVSQASPMVDFSLNQNTELQNNSFPLVSSDSGMSTMTSKRMLQEEVNSDIRRSRGFPSDY
NMFDELHPQKSQDWGLSSVGSTFNASHHSTIPGTLDISPSMLVQQGISSMKRNGQNGISP
ISNAFSSREESGNVNPMGGNLLTVKAEQLPDASYQSSFFPDQFGQDDLMSALLKQQESVG
PVETEFGFDGYALDNLPV

Transcript Sequence

Gene sequence data has not been registered.